Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Gm10576-201ENSMUST00000191927 825 ntBASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup98Q6PFD9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.33■□□□□ 0.53
Nup98Q6PFD9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.33■□□□□ 0.52
Nup98Q6PFD9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nup98Q6PFD9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nup98Q6PFD9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm22065-201ENSMUST00000103753 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm22066-201ENSMUST00000103761 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24932-201ENSMUST00000103763 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24115-201ENSMUST00000103799 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm22190-201ENSMUST00000103827 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm22191-201ENSMUST00000103831 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24721-201ENSMUST00000103849 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm28018-201ENSMUST00000103869 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm26399-201ENSMUST00000103937 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm25349-201ENSMUST00000177728 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm23616-201ENSMUST00000177797 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm25871-201ENSMUST00000177816 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24752-201ENSMUST00000178240 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24496-201ENSMUST00000178287 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm25649-201ENSMUST00000178476 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm25548-201ENSMUST00000178681 110 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms