Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf220Q6PDX6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Gm10698-201ENSMUST00000182663 604 ntBASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf220Q6PDX6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf220Q6PDX6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms