Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.86■□□□□ 0.29
ShbQ6PD21 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.86■□□□□ 0.29
ShbQ6PD21 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ShbQ6PD21 Gm6912-201ENSMUST00000117218 544 ntBASIC16.86■□□□□ 0.29
ShbQ6PD21 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.86■□□□□ 0.29
ShbQ6PD21 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.86■□□□□ 0.29
ShbQ6PD21 Gm15483-201ENSMUST00000120338 456 ntBASIC16.86■□□□□ 0.29
ShbQ6PD21 Gm27533-201ENSMUST00000183800 152 ntBASIC16.86■□□□□ 0.29
ShbQ6PD21 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.86■□□□□ 0.29
ShbQ6PD21 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.86■□□□□ 0.29
ShbQ6PD21 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.86■□□□□ 0.29
ShbQ6PD21 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ShbQ6PD21 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShbQ6PD21 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.85■□□□□ 0.29
ShbQ6PD21 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShbQ6PD21 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShbQ6PD21 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShbQ6PD21 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
ShbQ6PD21 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Mir7085-201ENSMUST00000184353 66 ntBASIC16.84■□□□□ 0.29
ShbQ6PD21 Gm44344-201ENSMUST00000200287 129 ntBASIC16.84■□□□□ 0.29
ShbQ6PD21 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Gm6218-201ENSMUST00000219812 628 ntBASIC16.84■□□□□ 0.29
ShbQ6PD21 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShbQ6PD21 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShbQ6PD21 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
ShbQ6PD21 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShbQ6PD21 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShbQ6PD21 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.83■□□□□ 0.29
ShbQ6PD21 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Gm14722-201ENSMUST00000118943 689 ntBASIC16.83■□□□□ 0.28
ShbQ6PD21 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Gm24694-201ENSMUST00000180054 110 ntBASIC16.83■□□□□ 0.28
ShbQ6PD21 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ShbQ6PD21 Gm27663-201ENSMUST00000184839 110 ntBASIC16.83■□□□□ 0.28
ShbQ6PD21 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ShbQ6PD21 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.83■□□□□ 0.28
ShbQ6PD21 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.83■□□□□ 0.28
ShbQ6PD21 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ShbQ6PD21 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ShbQ6PD21 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShbQ6PD21 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.82■□□□□ 0.28
ShbQ6PD21 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.82■□□□□ 0.28
ShbQ6PD21 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms