Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slf2Q6P9P0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.35■□□□□ 0.69
Slf2Q6P9P0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slf2Q6P9P0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slf2Q6P9P0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slf2Q6P9P0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf2Q6P9P0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf2Q6P9P0 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf2Q6P9P0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf2Q6P9P0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 AA543401-201ENSMUST00000164248 1269 ntBASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf2Q6P9P0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Gm20553-201ENSMUST00000204205 844 ntBASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf2Q6P9P0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms