Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm6089-201ENSMUST00000197666 938 ntBASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgb4Q6P8W9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Gm12260-201ENSMUST00000122447 411 ntBASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Gm6550-201ENSMUST00000187574 993 ntBASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Gm2213-201ENSMUST00000197485 688 ntBASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgb4Q6P8W9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gm11780-201ENSMUST00000136880 516 ntBASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gm25406-201ENSMUST00000157599 105 ntBASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gm5264-201ENSMUST00000190584 848 ntBASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gm9172-201ENSMUST00000212092 954 ntBASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgb4Q6P8W9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Gm11779-201ENSMUST00000118541 368 ntBASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms