Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Ank2-226ENSMUST00000189368 339 ntBASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac4Q6NZM9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Gm18622-201ENSMUST00000219361 595 ntBASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac4Q6NZM9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Hdac4Q6NZM9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms