Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzrn3Q69ZS0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzrn3Q69ZS0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzrn3Q69ZS0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzrn3Q69ZS0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzrn3Q69ZS0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Gm27646-201ENSMUST00000183989 110 ntBASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzrn3Q69ZS0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdzrn3Q69ZS0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzrn3Q69ZS0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzrn3Q69ZS0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzrn3Q69ZS0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms