Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg9aQ68FE2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atg9aQ68FE2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg9aQ68FE2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg9aQ68FE2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atg9aQ68FE2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg9aQ68FE2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Gm17968-201ENSMUST00000194902 784 ntBASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.82■□□□□ 0.6
Atg9aQ68FE2 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg9aQ68FE2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 App-207ENSMUST00000227737 2827 ntBASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg9aQ68FE2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg9aQ68FE2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Mir3113-201ENSMUST00000175478 76 ntBASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.79■□□□□ 0.6
Atg9aQ68FE2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atg9aQ68FE2 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms