Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Gm12085-201ENSMUST00000119263 940 ntBASIC13.13□□□□□ -0.31
Commd3Q63829 Gm7638-201ENSMUST00000121348 967 ntBASIC13.13□□□□□ -0.31
Commd3Q63829 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.12□□□□□ -0.31
Commd3Q63829 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 BC037039-201ENSMUST00000192003 2205 ntBASIC13.12□□□□□ -0.31
Commd3Q63829 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.12□□□□□ -0.31
Commd3Q63829 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.12□□□□□ -0.31
Commd3Q63829 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.12□□□□□ -0.31
Commd3Q63829 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Commd3Q63829 Gm27405-201ENSMUST00000184201 112 ntBASIC13.12□□□□□ -0.31
Commd3Q63829 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.12□□□□□ -0.31
Commd3Q63829 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Commd3Q63829 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Commd3Q63829 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.11□□□□□ -0.31
Commd3Q63829 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.11□□□□□ -0.31
Commd3Q63829 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Gm27275-201ENSMUST00000184318 272 ntBASIC13.11□□□□□ -0.31
Commd3Q63829 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.11□□□□□ -0.31
Commd3Q63829 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.11□□□□□ -0.31
Commd3Q63829 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Commd3Q63829 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.11□□□□□ -0.31
Commd3Q63829 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Commd3Q63829 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.11□□□□□ -0.31
Commd3Q63829 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Commd3Q63829 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Commd3Q63829 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Commd3Q63829 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Commd3Q63829 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Commd3Q63829 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.1□□□□□ -0.31
Commd3Q63829 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Commd3Q63829 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Commd3Q63829 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Commd3Q63829 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms