Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.73■□□□□ 0.27
Six2Q62232 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Six2Q62232 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Six2Q62232 Ank2-226ENSMUST00000189368 339 ntBASIC16.73■□□□□ 0.27
Six2Q62232 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.73■□□□□ 0.27
Six2Q62232 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.73■□□□□ 0.27
Six2Q62232 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Gm12497-201ENSMUST00000138778 237 ntBASIC16.72■□□□□ 0.27
Six2Q62232 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.72■□□□□ 0.27
Six2Q62232 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.72■□□□□ 0.27
Six2Q62232 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Six2Q62232 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.72■□□□□ 0.27
Six2Q62232 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.72■□□□□ 0.27
Six2Q62232 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Six2Q62232 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Six2Q62232 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six2Q62232 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Six2Q62232 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.71■□□□□ 0.27
Six2Q62232 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Six2Q62232 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.71■□□□□ 0.27
Six2Q62232 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.71■□□□□ 0.27
Six2Q62232 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Six2Q62232 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six2Q62232 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six2Q62232 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.7■□□□□ 0.26
Six2Q62232 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.7■□□□□ 0.26
Six2Q62232 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Six2Q62232 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.7■□□□□ 0.26
Six2Q62232 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.7■□□□□ 0.26
Six2Q62232 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.7■□□□□ 0.26
Six2Q62232 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.7■□□□□ 0.26
Six2Q62232 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.7■□□□□ 0.26
Six2Q62232 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.7■□□□□ 0.26
Six2Q62232 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.7■□□□□ 0.26
Six2Q62232 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.7■□□□□ 0.26
Six2Q62232 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Six2Q62232 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six2Q62232 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six2Q62232 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six2Q62232 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six2Q62232 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.69■□□□□ 0.26
Six2Q62232 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.69■□□□□ 0.26
Six2Q62232 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.69■□□□□ 0.26
Six2Q62232 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Six2Q62232 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six2Q62232 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.69■□□□□ 0.26
Six2Q62232 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six2Q62232 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms