Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim27Q62158 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim27Q62158 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim27Q62158 Gm8655-201ENSMUST00000221159 852 ntBASIC19.28■□□□□ 0.68
Trim27Q62158 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Grk6-207ENSMUST00000225925 2769 ntBASIC19.28■□□□□ 0.68
Trim27Q62158 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim27Q62158 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim27Q62158 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.28■□□□□ 0.68
Trim27Q62158 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim27Q62158 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim27Q62158 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim27Q62158 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim27Q62158 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim27Q62158 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim27Q62158 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim27Q62158 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim27Q62158 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44357-201ENSMUST00000195897 142 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm19658-201ENSMUST00000196231 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44367-201ENSMUST00000196836 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44350-201ENSMUST00000197197 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44390-201ENSMUST00000197533 144 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44313-201ENSMUST00000198018 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44486-201ENSMUST00000198508 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44314-201ENSMUST00000199263 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44394-201ENSMUST00000199558 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44484-201ENSMUST00000199873 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44466-201ENSMUST00000200264 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Gm44359-201ENSMUST00000200671 138 ntBASIC19.27■□□□□ 0.68
Trim27Q62158 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim27Q62158 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Trim27Q62158 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim27Q62158 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.27■□□□□ 0.67
Trim27Q62158 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim27Q62158 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.27■□□□□ 0.67
Trim27Q62158 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim27Q62158 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Trim27Q62158 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim27Q62158 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim27Q62158 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim27Q62158 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Trim27Q62158 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trim27Q62158 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim27Q62158 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim27Q62158 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim27Q62158 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim27Q62158 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim27Q62158 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim27Q62158 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim27Q62158 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Gm19164-201ENSMUST00000210667 640 ntBASIC19.25■□□□□ 0.67
Trim27Q62158 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim27Q62158 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Trim27Q62158 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.25■□□□□ 0.67
Trim27Q62158 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Trim27Q62158 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim27Q62158 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim27Q62158 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms