Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Gli3Q61602 Mir3102-201ENSMUST00000175555 104 ntBASIC21.01■□□□□ 0.95
Gli3Q61602 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21■□□□□ 0.95
Gli3Q61602 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC21■□□□□ 0.95
Gli3Q61602 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gli3Q61602 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC21■□□□□ 0.95
Gli3Q61602 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21■□□□□ 0.95
Gli3Q61602 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC21■□□□□ 0.95
Gli3Q61602 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Wnt10b-206ENSMUST00000228546 2709 ntBASIC21■□□□□ 0.95
Gli3Q61602 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Gli3Q61602 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli3Q61602 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Gli3Q61602 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Gli3Q61602 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC20.99■□□□□ 0.95
Gli3Q61602 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gli3Q61602 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gli3Q61602 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gli3Q61602 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gli3Q61602 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gli3Q61602 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Gli3Q61602 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Gli3Q61602 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC20.98■□□□□ 0.95
Gli3Q61602 Gm8062-201ENSMUST00000139696 444 ntBASIC20.98■□□□□ 0.95
Gli3Q61602 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.98■□□□□ 0.95
Gli3Q61602 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.98■□□□□ 0.95
Gli3Q61602 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gli3Q61602 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC20.97■□□□□ 0.95
Gli3Q61602 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.97■□□□□ 0.95
Gli3Q61602 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.97■□□□□ 0.95
Gli3Q61602 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Gli3Q61602 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.97■□□□□ 0.95
Gli3Q61602 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Gli3Q61602 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Gm42466-201ENSMUST00000202099 1301 ntBASIC20.97■□□□□ 0.95
Gli3Q61602 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Gm12960-201ENSMUST00000120017 1066 ntBASIC20.97■□□□□ 0.95
Gli3Q61602 Gm9522-201ENSMUST00000182394 926 ntBASIC20.97■□□□□ 0.95
Gli3Q61602 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC20.97■□□□□ 0.95
Gli3Q61602 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.97■□□□□ 0.95
Gli3Q61602 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli3Q61602 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Gm15198-201ENSMUST00000117283 177 ntBASIC20.96■□□□□ 0.95
Gli3Q61602 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
Gli3Q61602 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC20.96■□□□□ 0.95
Gli3Q61602 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.96■□□□□ 0.95
Gli3Q61602 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC20.96■□□□□ 0.95
Gli3Q61602 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli3Q61602 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gli3Q61602 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC20.95■□□□□ 0.94
Gli3Q61602 Gm15678-201ENSMUST00000117573 960 ntBASIC20.95■□□□□ 0.94
Gli3Q61602 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC20.95■□□□□ 0.94
Gli3Q61602 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gli3Q61602 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC20.95■□□□□ 0.94
Gli3Q61602 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms