Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Gm13453-201ENSMUST00000118708 357 ntBASIC17.89■□□□□ 0.45
Foxn1Q61575 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Foxn1Q61575 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.89■□□□□ 0.45
Foxn1Q61575 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.89■□□□□ 0.45
Foxn1Q61575 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Foxn1Q61575 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Foxn1Q61575 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxn1Q61575 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Foxn1Q61575 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Foxn1Q61575 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.88■□□□□ 0.45
Foxn1Q61575 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.88■□□□□ 0.45
Foxn1Q61575 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Foxn1Q61575 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxn1Q61575 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Gm6415-201ENSMUST00000118488 348 ntBASIC17.87■□□□□ 0.45
Foxn1Q61575 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Gm19164-201ENSMUST00000210667 640 ntBASIC17.87■□□□□ 0.45
Foxn1Q61575 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Foxn1Q61575 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Foxn1Q61575 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.87■□□□□ 0.45
Foxn1Q61575 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Syt7-205ENSMUST00000224135 1557 ntBASIC17.87■□□□□ 0.45
Foxn1Q61575 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxn1Q61575 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.86■□□□□ 0.45
Foxn1Q61575 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Foxn1Q61575 Gm16198-201ENSMUST00000118766 670 ntBASIC17.86■□□□□ 0.45
Foxn1Q61575 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.86■□□□□ 0.45
Foxn1Q61575 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.86■□□□□ 0.45
Foxn1Q61575 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Foxn1Q61575 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.86■□□□□ 0.45
Foxn1Q61575 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.86■□□□□ 0.45
Foxn1Q61575 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Foxn1Q61575 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.85■□□□□ 0.45
Foxn1Q61575 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Gm12008-201ENSMUST00000117791 755 ntBASIC17.85■□□□□ 0.45
Foxn1Q61575 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.85■□□□□ 0.45
Foxn1Q61575 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.85■□□□□ 0.45
Foxn1Q61575 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.85■□□□□ 0.45
Foxn1Q61575 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxn1Q61575 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms