Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.56□□□□□ -0.56
Foxc1Q61572 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.56□□□□□ -0.56
Foxc1Q61572 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.56□□□□□ -0.56
Foxc1Q61572 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.56□□□□□ -0.56
Foxc1Q61572 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm13312-201ENSMUST00000119631 718 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm22885-201ENSMUST00000157410 107 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Mir8098-201ENSMUST00000184011 137 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm43347-201ENSMUST00000200226 580 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.55□□□□□ -0.56
Foxc1Q61572 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Foxc1Q61572 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Foxc1Q61572 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Foxc1Q61572 Gm28745-201ENSMUST00000190069 305 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms