Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim25Q61510 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim25Q61510 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.06■□□□□ 0.32
Trim25Q61510 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim25Q61510 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim25Q61510 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Trim25Q61510 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim25Q61510 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim25Q61510 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Trim25Q61510 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Trim25Q61510 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim25Q61510 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim25Q61510 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim25Q61510 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim25Q61510 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim25Q61510 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim25Q61510 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Gm20049-201ENSMUST00000219950 730 ntBASIC17.04■□□□□ 0.32
Trim25Q61510 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim25Q61510 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim25Q61510 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trim25Q61510 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim25Q61510 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim25Q61510 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim25Q61510 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim25Q61510 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Trim25Q61510 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim25Q61510 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim25Q61510 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Gm18115-201ENSMUST00000221209 621 ntBASIC17.03■□□□□ 0.32
Trim25Q61510 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim25Q61510 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim25Q61510 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim25Q61510 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim25Q61510 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim25Q61510 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trim25Q61510 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim25Q61510 Gm44450-201ENSMUST00000199528 114 ntBASIC17.02■□□□□ 0.32
Trim25Q61510 Gm10602-201ENSMUST00000098239 609 ntBASIC17.02■□□□□ 0.32
Trim25Q61510 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim25Q61510 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim25Q61510 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim25Q61510 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim25Q61510 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.02■□□□□ 0.31
Trim25Q61510 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trim25Q61510 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms