Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ecm1Q61508 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ecm1Q61508 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.32■□□□□ 0.36
Ecm1Q61508 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.32■□□□□ 0.36
Ecm1Q61508 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.32■□□□□ 0.36
Ecm1Q61508 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.31■□□□□ 0.36
Ecm1Q61508 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Gm25948-201ENSMUST00000175334 112 ntBASIC17.31■□□□□ 0.36
Ecm1Q61508 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.31■□□□□ 0.36
Ecm1Q61508 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.31■□□□□ 0.36
Ecm1Q61508 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ecm1Q61508 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.3■□□□□ 0.36
Ecm1Q61508 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.3■□□□□ 0.36
Ecm1Q61508 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Gm2272-201ENSMUST00000194903 582 ntBASIC17.3■□□□□ 0.36
Ecm1Q61508 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.3■□□□□ 0.36
Ecm1Q61508 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.3■□□□□ 0.36
Ecm1Q61508 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.3■□□□□ 0.36
Ecm1Q61508 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
Ecm1Q61508 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ecm1Q61508 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ecm1Q61508 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.29■□□□□ 0.36
Ecm1Q61508 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.29■□□□□ 0.36
Ecm1Q61508 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.29■□□□□ 0.36
Ecm1Q61508 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ecm1Q61508 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.29■□□□□ 0.36
Ecm1Q61508 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ecm1Q61508 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ecm1Q61508 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ecm1Q61508 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ecm1Q61508 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.28■□□□□ 0.36
Ecm1Q61508 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.28■□□□□ 0.36
Ecm1Q61508 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms