Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mre11Q61216 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Mre11Q61216 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Mre11Q61216 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.87■□□□□ 0.61
Mre11Q61216 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Mre11Q61216 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.87■□□□□ 0.61
Mre11Q61216 Gm44450-201ENSMUST00000199528 114 ntBASIC18.87■□□□□ 0.61
Mre11Q61216 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.87■□□□□ 0.61
Mre11Q61216 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.87■□□□□ 0.61
Mre11Q61216 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Mre11Q61216 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.87■□□□□ 0.61
Mre11Q61216 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Mre11Q61216 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mre11Q61216 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.86■□□□□ 0.61
Mre11Q61216 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.86■□□□□ 0.61
Mre11Q61216 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Mre11Q61216 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Gm12441-201ENSMUST00000121806 588 ntBASIC18.86■□□□□ 0.61
Mre11Q61216 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.86■□□□□ 0.61
Mre11Q61216 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.86■□□□□ 0.61
Mre11Q61216 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.86■□□□□ 0.61
Mre11Q61216 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.86■□□□□ 0.61
Mre11Q61216 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mre11Q61216 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Mre11Q61216 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Mre11Q61216 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Mre11Q61216 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mre11Q61216 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Mre11Q61216 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Gm37297-201ENSMUST00000192974 2384 ntBASIC18.84■□□□□ 0.61
Mre11Q61216 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.84■□□□□ 0.61
Mre11Q61216 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Gm18421-201ENSMUST00000204122 625 ntBASIC18.84■□□□□ 0.61
Mre11Q61216 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.84■□□□□ 0.61
Mre11Q61216 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.84■□□□□ 0.61
Mre11Q61216 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Mre11Q61216 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Mre11Q61216 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.84■□□□□ 0.61
Mre11Q61216 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.84■□□□□ 0.61
Mre11Q61216 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.84■□□□□ 0.61
Mre11Q61216 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mre11Q61216 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Mre11Q61216 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mre11Q61216 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Mre11Q61216 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mre11Q61216 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mre11Q61216 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Mre11Q61216 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.83■□□□□ 0.6
Mre11Q61216 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mre11Q61216 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms