Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.52■□□□□ 0.72
Irf9Q61179 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf9Q61179 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.52■□□□□ 0.72
Irf9Q61179 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.52■□□□□ 0.72
Irf9Q61179 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Irf9Q61179 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.52■□□□□ 0.72
Irf9Q61179 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Irf9Q61179 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Irf9Q61179 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf9Q61179 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Irf9Q61179 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.51■□□□□ 0.71
Irf9Q61179 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.51■□□□□ 0.71
Irf9Q61179 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.51■□□□□ 0.71
Irf9Q61179 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Irf9Q61179 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Irf9Q61179 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.51■□□□□ 0.71
Irf9Q61179 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Irf9Q61179 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.51■□□□□ 0.71
Irf9Q61179 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Irf9Q61179 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Irf9Q61179 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Irf9Q61179 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf9Q61179 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.51■□□□□ 0.71
Irf9Q61179 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf9Q61179 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf9Q61179 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.5■□□□□ 0.71
Irf9Q61179 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Irf9Q61179 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.5■□□□□ 0.71
Irf9Q61179 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.5■□□□□ 0.71
Irf9Q61179 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf9Q61179 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf9Q61179 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf9Q61179 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.5■□□□□ 0.71
Irf9Q61179 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.49■□□□□ 0.71
Irf9Q61179 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Irf9Q61179 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.49■□□□□ 0.71
Irf9Q61179 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Gm2213-201ENSMUST00000197485 688 ntBASIC19.49■□□□□ 0.71
Irf9Q61179 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.49■□□□□ 0.71
Irf9Q61179 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.49■□□□□ 0.71
Irf9Q61179 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Gm10175-201ENSMUST00000086013 645 ntBASIC19.49■□□□□ 0.71
Irf9Q61179 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.49■□□□□ 0.71
Irf9Q61179 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Irf9Q61179 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Irf9Q61179 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Irf9Q61179 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Irf9Q61179 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.48■□□□□ 0.71
Irf9Q61179 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.48■□□□□ 0.71
Irf9Q61179 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.48■□□□□ 0.71
Irf9Q61179 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.48■□□□□ 0.71
Irf9Q61179 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.48■□□□□ 0.71
Irf9Q61179 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Irf9Q61179 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Irf9Q61179 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.48■□□□□ 0.71
Irf9Q61179 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Irf9Q61179 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms