Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.01■□□□□ 0.47
Prpf4bQ61136 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.01■□□□□ 0.47
Prpf4bQ61136 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Prpf4bQ61136 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf4bQ61136 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18■□□□□ 0.47
Prpf4bQ61136 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18■□□□□ 0.47
Prpf4bQ61136 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Prpf4bQ61136 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18■□□□□ 0.47
Prpf4bQ61136 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18■□□□□ 0.47
Prpf4bQ61136 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18■□□□□ 0.47
Prpf4bQ61136 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18■□□□□ 0.47
Prpf4bQ61136 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Prpf4bQ61136 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18■□□□□ 0.47
Prpf4bQ61136 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Prpf4bQ61136 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf4bQ61136 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gm9103-201ENSMUST00000119371 405 ntBASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gm17807-201ENSMUST00000186869 298 ntBASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.99■□□□□ 0.47
Prpf4bQ61136 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.99■□□□□ 0.47
Prpf4bQ61136 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf4bQ61136 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.98■□□□□ 0.47
Prpf4bQ61136 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.98■□□□□ 0.47
Prpf4bQ61136 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.98■□□□□ 0.47
Prpf4bQ61136 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf4bQ61136 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf4bQ61136 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf4bQ61136 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf4bQ61136 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms