Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cln3Q61124 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cln3Q61124 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cln3Q61124 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cln3Q61124 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cln3Q61124 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cln3Q61124 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cln3Q61124 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cln3Q61124 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cln3Q61124 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cln3Q61124 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cln3Q61124 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.14■□□□□ 0.33
Cln3Q61124 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cln3Q61124 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cln3Q61124 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cln3Q61124 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Gm25948-201ENSMUST00000175334 112 ntBASIC17.14■□□□□ 0.33
Cln3Q61124 Gm42790-201ENSMUST00000201268 969 ntBASIC17.14■□□□□ 0.33
Cln3Q61124 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.14■□□□□ 0.33
Cln3Q61124 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cln3Q61124 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cln3Q61124 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cln3Q61124 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln3Q61124 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cln3Q61124 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.13■□□□□ 0.33
Cln3Q61124 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.13■□□□□ 0.33
Cln3Q61124 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.13■□□□□ 0.33
Cln3Q61124 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cln3Q61124 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.13■□□□□ 0.33
Cln3Q61124 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Cln3Q61124 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cln3Q61124 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cln3Q61124 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln3Q61124 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.12■□□□□ 0.33
Cln3Q61124 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cln3Q61124 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cln3Q61124 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.12■□□□□ 0.33
Cln3Q61124 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.12■□□□□ 0.33
Cln3Q61124 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.12■□□□□ 0.33
Cln3Q61124 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.12■□□□□ 0.33
Cln3Q61124 Rprl2-201ENSMUST00000157150 290 ntBASIC17.12■□□□□ 0.33
Cln3Q61124 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.12■□□□□ 0.33
Cln3Q61124 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm43125-201ENSMUST00000201724 730 ntBASIC17.12■□□□□ 0.33
Cln3Q61124 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.12■□□□□ 0.33
Cln3Q61124 Gm20949-201ENSMUST00000206478 952 ntBASIC17.12■□□□□ 0.33
Cln3Q61124 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cln3Q61124 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln3Q61124 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln3Q61124 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln3Q61124 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln3Q61124 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cln3Q61124 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln3Q61124 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln3Q61124 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln3Q61124 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.11■□□□□ 0.33
Cln3Q61124 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms