Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ptch1Q61115 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ptch1Q61115 Gm7901-201ENSMUST00000120430 1597 ntBASIC22.45■■□□□ 1.19
Ptch1Q61115 Gm45774-201ENSMUST00000211992 2665 ntBASIC22.45■■□□□ 1.18
Ptch1Q61115 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ptch1Q61115 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC22.45■■□□□ 1.18
Ptch1Q61115 AC125350.2-201ENSMUST00000224737 727 ntBASIC22.45■■□□□ 1.18
Ptch1Q61115 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Ptch1Q61115 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Gm15163-201ENSMUST00000120749 1302 ntBASIC22.45■■□□□ 1.18
Ptch1Q61115 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptch1Q61115 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptch1Q61115 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ptch1Q61115 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptch1Q61115 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptch1Q61115 Rbfox2-206ENSMUST00000227314 1810 ntBASIC22.44■■□□□ 1.18
Ptch1Q61115 Gm12859-201ENSMUST00000117834 427 ntBASIC22.44■■□□□ 1.18
Ptch1Q61115 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Ptch1Q61115 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptch1Q61115 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptch1Q61115 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ptch1Q61115 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ptch1Q61115 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ptch1Q61115 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ptch1Q61115 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC22.43■■□□□ 1.18
Ptch1Q61115 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptch1Q61115 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptch1Q61115 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ptch1Q61115 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC22.43■■□□□ 1.18
Ptch1Q61115 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC22.43■■□□□ 1.18
Ptch1Q61115 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Ptch1Q61115 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC22.43■■□□□ 1.18
Ptch1Q61115 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC22.43■■□□□ 1.18
Ptch1Q61115 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC22.43■■□□□ 1.18
Ptch1Q61115 Gm5357-201ENSMUST00000212720 1924 ntBASIC22.43■■□□□ 1.18
Ptch1Q61115 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ptch1Q61115 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptch1Q61115 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptch1Q61115 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptch1Q61115 Gm13337-201ENSMUST00000119183 1594 ntBASIC22.42■■□□□ 1.18
Ptch1Q61115 Gm8096-201ENSMUST00000209921 1591 ntBASIC22.42■■□□□ 1.18
Ptch1Q61115 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ptch1Q61115 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC22.42■■□□□ 1.18
Ptch1Q61115 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC22.42■■□□□ 1.18
Ptch1Q61115 Gm6218-201ENSMUST00000219812 628 ntBASIC22.42■■□□□ 1.18
Ptch1Q61115 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC22.42■■□□□ 1.18
Ptch1Q61115 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ptch1Q61115 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptch1Q61115 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Ptch1Q61115 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptch1Q61115 Gm12138-201ENSMUST00000122180 951 ntBASIC22.41■■□□□ 1.18
Ptch1Q61115 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ptch1Q61115 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC22.41■■□□□ 1.18
Ptch1Q61115 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptch1Q61115 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptch1Q61115 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptch1Q61115 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptch1Q61115 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC22.4■■□□□ 1.18
Ptch1Q61115 Gm27920-201ENSMUST00000183953 96 ntBASIC22.4■■□□□ 1.18
Ptch1Q61115 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC22.4■■□□□ 1.18
Ptch1Q61115 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ptch1Q61115 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ptch1Q61115 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC22.4■■□□□ 1.18
Ptch1Q61115 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC22.4■■□□□ 1.18
Ptch1Q61115 Mir7085-201ENSMUST00000184353 66 ntBASIC22.4■■□□□ 1.18
Ptch1Q61115 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptch1Q61115 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ptch1Q61115 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ptch1Q61115 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms