Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.26□□□□□ -0.13
Usf1Q61069 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Usf1Q61069 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.26□□□□□ -0.13
Usf1Q61069 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.26□□□□□ -0.13
Usf1Q61069 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.26□□□□□ -0.13
Usf1Q61069 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usf1Q61069 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usf1Q61069 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.26□□□□□ -0.13
Usf1Q61069 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usf1Q61069 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Usf1Q61069 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf1Q61069 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usf1Q61069 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
Usf1Q61069 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usf1Q61069 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.25□□□□□ -0.13
Usf1Q61069 Mir449b-201ENSMUST00000104833 80 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Gm27430-201ENSMUST00000184585 107 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Gm44333-201ENSMUST00000197168 107 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Gm20553-201ENSMUST00000204205 844 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.25□□□□□ -0.13
Usf1Q61069 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.25□□□□□ -0.13
Usf1Q61069 Gm18246-201ENSMUST00000221023 728 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.25□□□□□ -0.13
Usf1Q61069 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usf1Q61069 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usf1Q61069 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Usf1Q61069 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Usf1Q61069 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Usf1Q61069 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Usf1Q61069 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usf1Q61069 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.24□□□□□ -0.13
Usf1Q61069 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.24□□□□□ -0.13
Usf1Q61069 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.24□□□□□ -0.13
Usf1Q61069 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usf1Q61069 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Usf1Q61069 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Usf1Q61069 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.24□□□□□ -0.13
Usf1Q61069 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.24□□□□□ -0.13
Usf1Q61069 Gm5745-201ENSMUST00000183748 313 ntBASIC14.24□□□□□ -0.13
Usf1Q61069 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usf1Q61069 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usf1Q61069 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Usf1Q61069 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usf1Q61069 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms