Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.38■□□□□ 0.05
Col12a1Q60847 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.38■□□□□ 0.05
Col12a1Q60847 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Gm9824-201ENSMUST00000178707 561 ntBASIC15.38■□□□□ 0.05
Col12a1Q60847 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col12a1Q60847 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col12a1Q60847 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Col12a1Q60847 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.37■□□□□ 0.05
Col12a1Q60847 Gm9908-201ENSMUST00000211534 448 ntBASIC15.37■□□□□ 0.05
Col12a1Q60847 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col12a1Q60847 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Gm14042-201ENSMUST00000120139 833 ntBASIC15.37■□□□□ 0.05
Col12a1Q60847 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.37■□□□□ 0.05
Col12a1Q60847 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Col12a1Q60847 Gm14767-201ENSMUST00000121559 586 ntBASIC15.37■□□□□ 0.05
Col12a1Q60847 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.37■□□□□ 0.05
Col12a1Q60847 Gm2272-201ENSMUST00000194903 582 ntBASIC15.37■□□□□ 0.05
Col12a1Q60847 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col12a1Q60847 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.36■□□□□ 0.05
Col12a1Q60847 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Col12a1Q60847 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.36■□□□□ 0.05
Col12a1Q60847 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gm22189-201ENSMUST00000103822 86 ntBASIC15.36■□□□□ 0.05
Col12a1Q60847 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.36■□□□□ 0.05
Col12a1Q60847 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms