Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Rps4l-201ENSMUST00000071745 943 ntBASIC17.58■□□□□ 0.4
Mkrn3Q60764 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Mkrn3Q60764 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mkrn3Q60764 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.57■□□□□ 0.4
Mkrn3Q60764 Gm14667-201ENSMUST00000119448 1350 ntBASIC17.57■□□□□ 0.4
Mkrn3Q60764 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Gm25406-201ENSMUST00000157599 105 ntBASIC17.57■□□□□ 0.4
Mkrn3Q60764 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mkrn3Q60764 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 AC159246.1-201ENSMUST00000214478 249 ntBASIC17.56■□□□□ 0.4
Mkrn3Q60764 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.56■□□□□ 0.4
Mkrn3Q60764 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mkrn3Q60764 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.55■□□□□ 0.4
Mkrn3Q60764 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mkrn3Q60764 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mkrn3Q60764 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms