Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.68■□□□□ 0.26
Shroom1Q5SX79 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom1Q5SX79 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.68■□□□□ 0.26
Shroom1Q5SX79 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm12260-201ENSMUST00000122447 411 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm25925-201ENSMUST00000158314 306 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm8825-201ENSMUST00000182565 998 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm4518-201ENSMUST00000182638 718 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm2756-201ENSMUST00000195851 400 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom1Q5SX79 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Gm14494-201ENSMUST00000118786 435 ntBASIC16.66■□□□□ 0.26
Shroom1Q5SX79 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Gm27646-201ENSMUST00000183989 110 ntBASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.66■□□□□ 0.26
Shroom1Q5SX79 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.66■□□□□ 0.26
Shroom1Q5SX79 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms