Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps54Q5SPW0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps54Q5SPW0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Vps54Q5SPW0 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.83■□□□□ 0.61
Vps54Q5SPW0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Gm7222-201ENSMUST00000117512 906 ntBASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps54Q5SPW0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.82■□□□□ 0.6
Vps54Q5SPW0 AW822252-206ENSMUST00000208904 237 ntBASIC18.82■□□□□ 0.6
Vps54Q5SPW0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.82■□□□□ 0.6
Vps54Q5SPW0 AV026068-213ENSMUST00000223675 1171 ntBASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps54Q5SPW0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps54Q5SPW0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps54Q5SPW0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Prob1-201ENSMUST00000097619 3021 ntBASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Gm13036-201ENSMUST00000117799 748 ntBASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms