Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm27622-201ENSMUST00000183779 60 ntBASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc88aQ5SNZ0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm19164-201ENSMUST00000210667 640 ntBASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc88aQ5SNZ0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc88aQ5SNZ0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm15427-201ENSMUST00000117288 531 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm15358-201ENSMUST00000119249 520 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm11745-201ENSMUST00000121669 448 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 App-207ENSMUST00000227737 2827 ntBASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc88aQ5SNZ0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms