Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-2Q5R1I3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7-2Q5R1I3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7-2Q5R1I3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7-2Q5R1I3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7-2Q5R1I3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7-2Q5R1I3 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.7□□□□□ -0.54
Trav7-2Q5R1I3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7-2Q5R1I3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms