Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Gm5866-201ENSMUST00000177881 973 ntBASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-2Q5R1B6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gm43438-201ENSMUST00000198133 379 ntBASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gm10154-201ENSMUST00000084445 354 ntBASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8d-2Q5R1B6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms