Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm8825-201ENSMUST00000182565 998 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm4518-201ENSMUST00000182638 718 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf20Q5DTM8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf20Q5DTM8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Gm25745-201ENSMUST00000174945 133 ntBASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Gm17807-201ENSMUST00000186869 298 ntBASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf20Q5DTM8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Gm27867-201ENSMUST00000184778 125 ntBASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms