Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Gm29199-201ENSMUST00000187766 775 ntBASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Hsf1-207ENSMUST00000228371 2102 ntBASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc2Q4U2R1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Dmtn-210ENSMUST00000228824 2377 ntBASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc2Q4U2R1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm12134-201ENSMUST00000122109 520 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm28911-201ENSMUST00000188837 117 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm7561-201ENSMUST00000211203 886 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm6091-201ENSMUST00000098307 165 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Gm7783-201ENSMUST00000204795 781 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc2Q4U2R1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm11543-201ENSMUST00000120758 370 ntBASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm5523-201ENSMUST00000180415 997 ntBASIC9.2□□□□□ -0.94
Herc2Q4U2R1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 AU022133-201ENSMUST00000200601 873 ntBASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms