Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Syne3Q4FZC9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne3Q4FZC9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne3Q4FZC9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne3Q4FZC9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Syne3Q4FZC9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Gm10819-201ENSMUST00000099988 561 ntBASIC16.69■□□□□ 0.26
Syne3Q4FZC9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Syne3Q4FZC9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syne3Q4FZC9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne3Q4FZC9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Gm44454-201ENSMUST00000198541 138 ntBASIC16.66■□□□□ 0.26
Syne3Q4FZC9 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.66■□□□□ 0.26
Syne3Q4FZC9 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms