Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Gm7787-201ENSMUST00000216858 688 ntBASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38aQ4FK66 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.28■□□□□ 0.52
Prpf38aQ4FK66 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Prpf38aQ4FK66 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.27■□□□□ 0.51
Prpf38aQ4FK66 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms