Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BC051142Q3V0M8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Sybu-209ENSMUST00000228639 4113 ntBASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC051142Q3V0M8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Gm6257-201ENSMUST00000163864 910 ntBASIC16.79■□□□□ 0.28
BC051142Q3V0M8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC051142Q3V0M8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Grk6-207ENSMUST00000225925 2769 ntBASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC051142Q3V0M8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms