Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Gm8520-201ENSMUST00000186517 868 ntBASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Odf3b-204ENSMUST00000227834 930 ntBASIC14.78□□□□□ -0.04
Trim40Q3UWA4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim40Q3UWA4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim40Q3UWA4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim40Q3UWA4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim40Q3UWA4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim40Q3UWA4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Gm29257-201ENSMUST00000186115 639 ntBASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim40Q3UWA4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Gm44450-201ENSMUST00000199528 114 ntBASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim40Q3UWA4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim40Q3UWA4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms