Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Gm12260-201ENSMUST00000122447 411 ntBASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Gm4899-201ENSMUST00000178708 719 ntBASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Gm5264-201ENSMUST00000190584 848 ntBASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf223Q3UV31 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf223Q3UV31 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
Rnf223Q3UV31 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf223Q3UV31 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm15467-201ENSMUST00000120582 445 ntBASIC15.2■□□□□ 0.02
Rnf223Q3UV31 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm9727-201ENSMUST00000161387 555 ntBASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm9682-201ENSMUST00000197505 556 ntBASIC15.2■□□□□ 0.02
Rnf223Q3UV31 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf223Q3UV31 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Gm11594-201ENSMUST00000122313 162 ntBASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf223Q3UV31 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms