Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.72■□□□□ 0.11
Fam196aQ3USH1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fam196aQ3USH1 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.71■□□□□ 0.11
Fam196aQ3USH1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.71■□□□□ 0.11
Fam196aQ3USH1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.71■□□□□ 0.11
Fam196aQ3USH1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Gm12490-201ENSMUST00000120255 560 ntBASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Gm8969-201ENSMUST00000199694 526 ntBASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fam196aQ3USH1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Fam196aQ3USH1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Fam196aQ3USH1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Fam196aQ3USH1 Syt7-205ENSMUST00000224135 1557 ntBASIC15.7■□□□□ 0.1
Fam196aQ3USH1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.7■□□□□ 0.1
Fam196aQ3USH1 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Fam196aQ3USH1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Gm6888-201ENSMUST00000221983 706 ntBASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam196aQ3USH1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms