Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.33■□□□□ 0.52
Rnf180Q3U827 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf180Q3U827 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.32■□□□□ 0.52
Rnf180Q3U827 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.32■□□□□ 0.52
Rnf180Q3U827 Gm15483-201ENSMUST00000120338 456 ntBASIC18.32■□□□□ 0.52
Rnf180Q3U827 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf180Q3U827 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.32■□□□□ 0.52
Rnf180Q3U827 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.32■□□□□ 0.52
Rnf180Q3U827 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf180Q3U827 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.31■□□□□ 0.52
Rnf180Q3U827 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.31■□□□□ 0.52
Rnf180Q3U827 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Gm9719-201ENSMUST00000162765 543 ntBASIC18.31■□□□□ 0.52
Rnf180Q3U827 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.31■□□□□ 0.52
Rnf180Q3U827 Gm10499-201ENSMUST00000174094 934 ntBASIC18.31■□□□□ 0.52
Rnf180Q3U827 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Rnf180Q3U827 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf180Q3U827 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Gm11661-201ENSMUST00000121761 1327 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 Gm9522-201ENSMUST00000182394 926 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf180Q3U827 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.3■□□□□ 0.52
Rnf180Q3U827 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf180Q3U827 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Gm5566-201ENSMUST00000116118 459 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Snora78-201ENSMUST00000158630 128 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Gm26461-201ENSMUST00000175064 290 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.29■□□□□ 0.52
Rnf180Q3U827 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf180Q3U827 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms