Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm9727-201ENSMUST00000161387 555 ntBASIC13.62□□□□□ -0.23
Q3U1D9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Q3U1D9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Gm7787-201ENSMUST00000216858 688 ntBASIC13.62□□□□□ -0.23
Q3U1D9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Q3U1D9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.62□□□□□ -0.23
Q3U1D9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Q3U1D9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Q3U1D9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Q3U1D9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Q3U1D9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3U1D9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Q3U1D9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Q3U1D9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Q3U1D9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.61□□□□□ -0.23
Q3U1D9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.61□□□□□ -0.23
Q3U1D9 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.61□□□□□ -0.23
Q3U1D9 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.61□□□□□ -0.23
Q3U1D9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q3U1D9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Q3U1D9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.6□□□□□ -0.23
Q3U1D9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Q3U1D9 Gm11594-201ENSMUST00000122313 162 ntBASIC13.6□□□□□ -0.23
Q3U1D9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.6□□□□□ -0.23
Q3U1D9 Gm5682-201ENSMUST00000173402 505 ntBASIC13.6□□□□□ -0.23
Q3U1D9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3U1D9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q3U1D9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.6□□□□□ -0.23
Q3U1D9 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.6□□□□□ -0.23
Q3U1D9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Q3U1D9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.6□□□□□ -0.23
Q3U1D9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3U1D9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.6□□□□□ -0.23
Q3U1D9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Q3U1D9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.59□□□□□ -0.23
Q3U1D9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3U1D9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms