Protein–RNA interactions for Protein: Q3TQS0

Calr4, Calreticulin 4, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr4Q3TQS0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calr4Q3TQS0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calr4Q3TQS0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Gm15378-201ENSMUST00000121894 207 ntBASIC20.51■□□□□ 0.87
Calr4Q3TQS0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr4Q3TQS0 Gm45605-201ENSMUST00000210265 4269 ntBASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr4Q3TQS0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Gm43697-201ENSMUST00000199637 2581 ntBASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr4Q3TQS0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr4Q3TQS0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Gm10602-201ENSMUST00000098239 609 ntBASIC20.47■□□□□ 0.87
Calr4Q3TQS0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Calr4Q3TQS0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Calr4Q3TQS0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms