Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Gm25406-201ENSMUST00000157599 105 ntBASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cul4aQ3TCH7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cul4aQ3TCH7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gm15794-201ENSMUST00000120182 631 ntBASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cul4aQ3TCH7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Gm13312-201ENSMUST00000119631 718 ntBASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Gm11950-201ENSMUST00000121615 838 ntBASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Gm10231-201ENSMUST00000181584 441 ntBASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Gm10175-202ENSMUST00000208752 441 ntBASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cul4aQ3TCH7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms