Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm37856-201ENSMUST00000191634 999 ntBASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Gm6211-202ENSMUST00000167849 925 ntBASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Gm27000-201ENSMUST00000182943 842 ntBASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccbe1Q3MI99 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gm7290-201ENSMUST00000104990 617 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gm12918-201ENSMUST00000120234 636 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gm15710-201ENSMUST00000121821 636 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Mir6349-201ENSMUST00000184059 97 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gm5075-201ENSMUST00000196916 622 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gm10812-201ENSMUST00000099864 546 ntBASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms