Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm8062-201ENSMUST00000139696 444 ntBASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm37714-201ENSMUST00000194742 342 ntBASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.34■□□□□ 0.05
Col9a1Q05722 AU022133-201ENSMUST00000200601 873 ntBASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC15.34■□□□□ 0.05
Col9a1Q05722 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Col9a1Q05722 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col9a1Q05722 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col9a1Q05722 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col9a1Q05722 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Gm14042-201ENSMUST00000120139 833 ntBASIC15.33■□□□□ 0.04
Col9a1Q05722 Gm13461-201ENSMUST00000120980 662 ntBASIC15.33■□□□□ 0.04
Col9a1Q05722 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.33■□□□□ 0.04
Col9a1Q05722 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.33■□□□□ 0.04
Col9a1Q05722 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Col9a1Q05722 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.33■□□□□ 0.04
Col9a1Q05722 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col9a1Q05722 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col9a1Q05722 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col9a1Q05722 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col9a1Q05722 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.33■□□□□ 0.04
Col9a1Q05722 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm15626-201ENSMUST00000117478 868 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.32■□□□□ 0.04
Col9a1Q05722 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm9002-201ENSMUST00000178437 499 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm27243-201ENSMUST00000183964 521 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm8969-201ENSMUST00000199694 526 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm43703-201ENSMUST00000200523 763 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm2594-201ENSMUST00000214774 742 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Gm5035-201ENSMUST00000215581 927 ntBASIC15.32■□□□□ 0.04
Col9a1Q05722 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Col9a1Q05722 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col9a1Q05722 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col9a1Q05722 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.31■□□□□ 0.04
Col9a1Q05722 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.31■□□□□ 0.04
Col9a1Q05722 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col9a1Q05722 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col9a1Q05722 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.31■□□□□ 0.04
Col9a1Q05722 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.31■□□□□ 0.04
Col9a1Q05722 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.31■□□□□ 0.04
Col9a1Q05722 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.31■□□□□ 0.04
Col9a1Q05722 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col9a1Q05722 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms