Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm43170-201ENSMUST00000199827 612 ntBASIC19.69■□□□□ 0.74
Cacna1sQ02789 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.68■□□□□ 0.74
Cacna1sQ02789 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.68■□□□□ 0.74
Cacna1sQ02789 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.68■□□□□ 0.74
Cacna1sQ02789 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.68■□□□□ 0.74
Cacna1sQ02789 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1sQ02789 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Mir1938-201ENSMUST00000158746 100 ntBASIC19.67■□□□□ 0.74
Cacna1sQ02789 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Gm4875-201ENSMUST00000118257 786 ntBASIC19.67■□□□□ 0.74
Cacna1sQ02789 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cacna1sQ02789 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.66■□□□□ 0.74
Cacna1sQ02789 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.66■□□□□ 0.74
Cacna1sQ02789 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.66■□□□□ 0.74
Cacna1sQ02789 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.66■□□□□ 0.74
Cacna1sQ02789 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1sQ02789 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Gm18018-201ENSMUST00000198273 408 ntBASIC19.65■□□□□ 0.74
Cacna1sQ02789 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.65■□□□□ 0.74
Cacna1sQ02789 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.65■□□□□ 0.74
Cacna1sQ02789 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cacna1sQ02789 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1sQ02789 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1sQ02789 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.64■□□□□ 0.74
Cacna1sQ02789 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1sQ02789 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Cacna1sQ02789 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.63■□□□□ 0.73
Cacna1sQ02789 AY702102-202ENSMUST00000194651 1173 ntBASIC19.63■□□□□ 0.73
Cacna1sQ02789 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1sQ02789 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms