Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm12350-201ENSMUST00000121208 462 ntBASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.82□□□□□ -0.04
Nkx3-2P97503 AW822252-206ENSMUST00000208904 237 ntBASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.82□□□□□ -0.04
Nkx3-2P97503 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx3-2P97503 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx3-2P97503 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx3-2P97503 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.81□□□□□ -0.04
Nkx3-2P97503 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Gm8097-201ENSMUST00000117903 829 ntBASIC14.8□□□□□ -0.04
Nkx3-2P97503 Gm13418-201ENSMUST00000119097 944 ntBASIC14.8□□□□□ -0.04
Nkx3-2P97503 Gm11780-201ENSMUST00000136880 516 ntBASIC14.8□□□□□ -0.04
Nkx3-2P97503 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Mir5126-201ENSMUST00000175513 77 ntBASIC14.8□□□□□ -0.04
Nkx3-2P97503 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms