Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Cacna1aP97445 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cacna1aP97445 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1aP97445 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cacna1aP97445 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.45□□□□□ -0.1
Cacna1aP97445 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.45□□□□□ -0.1
Cacna1aP97445 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cacna1aP97445 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Gm18187-201ENSMUST00000196476 984 ntBASIC14.45□□□□□ -0.1
Cacna1aP97445 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1aP97445 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cacna1aP97445 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cacna1aP97445 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.45□□□□□ -0.1
Cacna1aP97445 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.45□□□□□ -0.1
Cacna1aP97445 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1aP97445 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.44□□□□□ -0.1
Cacna1aP97445 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.44□□□□□ -0.1
Cacna1aP97445 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.44□□□□□ -0.1
Cacna1aP97445 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.44□□□□□ -0.1
Cacna1aP97445 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.44□□□□□ -0.1
Cacna1aP97445 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1aP97445 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
Cacna1aP97445 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1aP97445 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1aP97445 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1aP97445 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.43□□□□□ -0.1
Cacna1aP97445 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1aP97445 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
Cacna1aP97445 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Gm43125-201ENSMUST00000201724 730 ntBASIC14.43□□□□□ -0.1
Cacna1aP97445 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.43□□□□□ -0.1
Cacna1aP97445 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.43□□□□□ -0.1
Cacna1aP97445 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms