Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-3P97334 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Gm7063-201ENSMUST00000186840 981 ntBASIC19.65■□□□□ 0.74
Nkx2-3P97334 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.65■□□□□ 0.74
Nkx2-3P97334 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-3P97334 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx2-3P97334 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Nkx2-3P97334 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Gm25948-201ENSMUST00000175334 112 ntBASIC19.64■□□□□ 0.73
Nkx2-3P97334 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-3P97334 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.63■□□□□ 0.73
Nkx2-3P97334 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.63■□□□□ 0.73
Nkx2-3P97334 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 AA543401-201ENSMUST00000164248 1269 ntBASIC19.63■□□□□ 0.73
Nkx2-3P97334 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.63■□□□□ 0.73
Nkx2-3P97334 Gm44872-201ENSMUST00000207864 420 ntBASIC19.63■□□□□ 0.73
Nkx2-3P97334 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.63■□□□□ 0.73
Nkx2-3P97334 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.62■□□□□ 0.73
Nkx2-3P97334 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Gm14722-201ENSMUST00000118943 689 ntBASIC19.62■□□□□ 0.73
Nkx2-3P97334 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Gm43125-201ENSMUST00000201724 730 ntBASIC19.62■□□□□ 0.73
Nkx2-3P97334 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms