Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.15■□□□□ 0.18
Msx3P70354 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Msx3P70354 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Msx3P70354 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msx3P70354 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Msx3P70354 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Msx3P70354 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.14■□□□□ 0.17
Msx3P70354 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Msx3P70354 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.14■□□□□ 0.17
Msx3P70354 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.14■□□□□ 0.17
Msx3P70354 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Msx3P70354 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.14■□□□□ 0.17
Msx3P70354 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.14■□□□□ 0.17
Msx3P70354 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.14■□□□□ 0.17
Msx3P70354 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Gm27704-201ENSMUST00000185094 107 ntBASIC16.14■□□□□ 0.17
Msx3P70354 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.14■□□□□ 0.17
Msx3P70354 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.14■□□□□ 0.17
Msx3P70354 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.14■□□□□ 0.17
Msx3P70354 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.14■□□□□ 0.17
Msx3P70354 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Msx3P70354 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msx3P70354 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Msx3P70354 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.13■□□□□ 0.17
Msx3P70354 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Msx3P70354 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Msx3P70354 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.13■□□□□ 0.17
Msx3P70354 Gm33142-201ENSMUST00000193913 867 ntBASIC16.13■□□□□ 0.17
Msx3P70354 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Msx3P70354 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.13■□□□□ 0.17
Msx3P70354 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msx3P70354 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Msx3P70354 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msx3P70354 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Msx3P70354 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Msx3P70354 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msx3P70354 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msx3P70354 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm7284-201ENSMUST00000131667 944 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Msx3P70354 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Msx3P70354 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Msx3P70354 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.12■□□□□ 0.17
Msx3P70354 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm8825-201ENSMUST00000182565 998 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm4518-201ENSMUST00000182638 718 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.12■□□□□ 0.17
Msx3P70354 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms