Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Six5P70178 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Six5P70178 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six5P70178 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Six5P70178 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Six5P70178 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Six5P70178 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Six5P70178 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Six5P70178 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.71□□□□□ -0.05
Six5P70178 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.71□□□□□ -0.05
Six5P70178 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six5P70178 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Six5P70178 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Six5P70178 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Six5P70178 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.71□□□□□ -0.06
Six5P70178 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Six5P70178 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Six5P70178 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Six5P70178 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.7□□□□□ -0.06
Six5P70178 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Six5P70178 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Six5P70178 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.7□□□□□ -0.06
Six5P70178 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.7□□□□□ -0.06
Six5P70178 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Six5P70178 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six5P70178 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.7□□□□□ -0.06
Six5P70178 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.7□□□□□ -0.06
Six5P70178 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.69□□□□□ -0.06
Six5P70178 Gm4459-201ENSMUST00000118750 468 ntBASIC14.69□□□□□ -0.06
Six5P70178 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.69□□□□□ -0.06
Six5P70178 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Six5P70178 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six5P70178 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.68□□□□□ -0.06
Six5P70178 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms