Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.24□□□□□ -0.61
Rpl39P62892 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rpl39P62892 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.23□□□□□ -0.61
Rpl39P62892 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.23□□□□□ -0.61
Rpl39P62892 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.23□□□□□ -0.61
Rpl39P62892 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.23□□□□□ -0.61
Rpl39P62892 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.23□□□□□ -0.61
Rpl39P62892 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.23□□□□□ -0.61
Rpl39P62892 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.23□□□□□ -0.61
Rpl39P62892 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.23□□□□□ -0.61
Rpl39P62892 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.23□□□□□ -0.61
Rpl39P62892 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Rpl39P62892 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl39P62892 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Mir1199-201ENSMUST00000117015 119 ntBASIC11.22□□□□□ -0.61
Rpl39P62892 Gm12527-201ENSMUST00000117967 564 ntBASIC11.22□□□□□ -0.61
Rpl39P62892 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.22□□□□□ -0.61
Rpl39P62892 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.22□□□□□ -0.61
Rpl39P62892 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.22□□□□□ -0.61
Rpl39P62892 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rpl39P62892 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl39P62892 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.21□□□□□ -0.61
Rpl39P62892 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rpl39P62892 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rpl39P62892 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Rpl39P62892 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.21□□□□□ -0.61
Rpl39P62892 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.21□□□□□ -0.61
Rpl39P62892 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl39P62892 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.21□□□□□ -0.61
Rpl39P62892 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Rpl39P62892 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms